Flagship Pioneering
Senior Director / Vice President, Machine Learning (Generative Chemistry)
$279K–$412K
Cambridge, MA USA +1 · Director · Full-time · Posted Sep 25, 2026
- Location
- Cambridge, MA USA
FL117 - Experience
- 7+ years of scientific/engineering/computational experience in Pharma or Biotech settings; industry AI/ML experience preferred.
- Education
- MSc or PhD in Computer Science, AI/ML, Physics, Biophysics, or a related field.
About the job
Lead AI/ML and cheminformatics strategy, teams, and project delivery to build and deploy generative models for biomolecular design and drug discovery.
What you'll do
- Direct AI/ML and computational projects, including planning, budgets, timelines, and progress reporting.
- Oversee methods, pipelines, LLM-based agents and workflows, benchmarking, scaling, and production implementation.
- Manage and mentor scientists and engineers, support recruiting, and identify emerging AI/ML opportunities.
What they ask for
- MSc or PhD in Computer Science, AI/ML, Physics, Biophysics, or a related field.
- 7+ years of scientific, engineering, or computational experience in Pharma or Biotech settings.
- Depth across core tools and concepts including Python; modern ML frameworks (PyTorch or JAX/TensorFlow); version control; databases; deep learning architectures; and relevant informatics software.
- Demonstrated technical leadership, independent creative contributions, and ability to drive results through teams.
Nice to have
- Industry AI/ML experience; breadth in protein modeling/design, cheminformatics, biophysics/MD, or LLM/agentic automation.
- MLOps, cloud, generative modeling, docking, workflow orchestration, or relevant scientific software experience.
Pay
$279,000 - $412,500 USD base salary
Tools
Python, PyTorch, JAX, TensorFlow, DVC, LakeFS, MLflow, AWS
AI focus
Develop and deploy multimodal generative models for biomolecular design and drug discovery, including LLM-based agent/workflow design, benchmarking, and scaling.
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