Lila Sciences
Senior ML Scientist, Biological Systems
$268K–$358K
San Francisco, CA USA +1 · Senior · Full-time · Posted Sep 15, 2026
- Location
- San Francisco, CA USA
San Francisco, CA - Education
- PhD in machine learning, statistics, computational biology, computer science, bioengineering, physics, or a related quantitative field; equivalent industry impact may substitute for a strong publication record.
About the job
Develop interpretable, uncertainty-aware machine learning models for biological experimental data, guide experiments and validation, and integrate models into scientific decision-making and agent workflows.
What you'll do
- Build and evaluate models for perturbation, genetic, and multimodal experimental data; connect predictions to biological mechanisms and therapeutic opportunities.
- Partner with experimental scientists to guide data generation, validation, and experiment selection; design benchmarks and prioritize targets and mechanisms.
- Support domain-model integration into agentic workflows, including tool deployment and agent-harness development.
What they ask for
- PhD in a related quantitative field, with a strong publication record or equivalent industry impact.
- Experience developing models for high-dimensional biological data and connecting ML methods to biological mechanism and experimental design.
- Track record modeling generalization to unobserved conditions, such as sparse designs, held-out combinations, or new contexts.
- Expertise in uncertainty calibration and rigorous evaluation, plus strong programming, ML research workflows, communication, and research leadership.
Nice to have
- Mechanistic or probabilistic modeling, such as Bayesian hierarchical models, simulation-based inference, state-space or ODE-based models, or mechanism-informed ML.
- Experience with active learning, Bayesian optimal experimental design, closed-loop experimentation, or deploying models in scientific decision workflows.
Pay
$268,000 — $358,000 USD (base salary)
Tools
Bayesian hierarchical models, state-space, ODE-based models, neural differential equations
AI focus
Build domain models that support scientific reasoning and experimental decisions, and integrate them into agentic workflows and environments for training reasoning models.
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